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{{DISPLAYTITLE:3<sub>10</sub> helix}}
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[[Image:3 10 helix neg49 neg26 sideview.png|thumb|right|250px|Side view of a 3<sub>10</sub>-helix of [[alanine]] residues in [[atom]]ic detail. Two hydrogen bonds to the same peptide group are highlighted in magenta; the oxygen-hydrogen distance is 1.83 Å (183 pm).  The [[protein]] chain runs upwards, i.e., its N-terminus is at the bottom and its C-terminus at the top of the figure. Note that the sidechains point slightly ''downwards'', i.e., towards the N-terminus.]]
 
A '''3<sub>10</sub> helix''' is a type of [[secondary structure]] found (rarely) in [[protein]]s.
 
==Structure==
The amino acids in a 3<sub>10</sub>-helix are arranged in a right-handed [[helix|helical]] structure.  Each amino acid corresponds to a 120° turn in the helix (i.e., the helix has three residues per turn), and a translation of 2.0 Å (= 0.2&nbsp;nm) along the helical axis, and has 10 atoms in the ring formed by making the hydrogen bond. Most importantly, the [[amine|N-H]] group of an amino acid forms a [[hydrogen bond]] with the [[carbonyl|C&nbsp;=&nbsp;O]] group of the amino acid ''three'' residues earlier; this repeated ''i''&nbsp;+&nbsp;3&nbsp;→&nbsp;''i'' hydrogen bonding '''defines''' a 3<sub>10</sub>-helix.  Similar structures include the [[Alpha_helix|α-helix]] (''i''&nbsp;+&nbsp;4&nbsp;→&nbsp;''i'' hydrogen bonding) and the [[Pi_helix|π-helix]] ''i''&nbsp;+&nbsp;5&nbsp;→&nbsp;''i'' hydrogen bonding).
 
[[Image:310 helix topview.png|thumb|left|225px|Top view of the same helix shown to the rightThree [[carbonyl]] groups are pointing upwards towards the viewer, spaced roughly 120° apart on the circle, corresponding to 3.0 [[amino acid|amino-acid]] residues per turn of the helix.]]
 
Residues in 3<sub>10</sub>-helices typically adopt (φ, ψ) [[dihedral angle]]s near (−49°,&nbsp;−26°). More generally,  they adopt dihedral angles such that the ψ [[dihedral angle]] of one residue and the φ [[dihedral angle]] of the ''next'' residue sum to roughly −75°. For comparison, the sum of the dihedral angles for an α-helix is roughly −105°, whereas that for a π-helix is roughly −125°.
 
The general formula for the rotation angle Ω per residue of any polypeptide helix with ''trans'' isomers is given by the equation
 
:<math>
3 \cos \Omega = 1 - 4 \cos^{2} \left(\frac{\varphi + \psi}{2} \right).
</math>
 
==See also==
* [[alpha helix]]
* [[pi helix]]
* [[secondary structure]]
 
==References==
* Pauling L, Corey RB and Branson HR. (1951) "The Structure of Proteins: Two Hydrogen-Bonded Helical Configurations of the Polypeptide Chain", ''Proc. Nat. Acad. Sci. Wash.'', '''37''', 205.
 
{{Protein secondary structure}}
 
[[Category:Protein structural motifs]]
[[Category:Helices]]
 
{{protein-stub}}

Latest revision as of 21:25, 9 January 2015

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